Changing Horace settings

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It is possible to alter the default settings of Horace, depending on your personal preferences and/or computer specifications.


This is a set of basic configurations for Horace. In order to find out the current (default) settings, type

>> hor_config

This will return the following information:

    mem_chunk_size: 10000000
                  threads: 8
               ignore_nan: 1
               ignore_inf: 0
                log_level: 1
                  use_mex: 1
               delete_tmp: 1
        working_directory: 'C:\tmp'
     force_mex_if_use_mex: 0
    high_perf_config_info: [1×1 hpc_config]
               class_name: 'hor_config'
                 saveable: 1
         returns_defaults: 0
            config_folder: 'C:\Users\abuts\AppData\Roaming\MathWorks\MATLAB\mprogs_config'

To change one of the settings, type, for example;



  hc = hor_config;
  hc.mem_chunk_size = 500000;

Below are detailed the meanings of the various options.

mem_chunk_size refers to the number of pixels that are read into memory at a time when cutting data from a file. If your system is low on memory, it may be worth reducing this number. If you have a large amount of memory it is not, however, necessarily worth increasing this value much beyond the default setting of 10000000, as it does not result in much of a speed up when cutting.

thread is the number of OMP computational threads that can be used by mex code. If you have a multi-core machine you can increase this number to make better use of all / more of your cores, but setting it for more then number of the cores or higher than 8 does not usually improve the code productiovity and may even decrease it.

ignore_nan means that any NaNs (not-a-numbers) are ignored (if 1) wherever they occur in Horace. You do not usually need to change this value.

ignore_inf means that infinities are (or not) ignored depending on whether this value is set to 1 or 0. . You do not usually need to change this value.

log_level is a scalar. The larger it is, the more information Horace prints to the Matlab command window during operations. If it is set to -Inf then almost no information is printed to screen. The most useful are log levels 0, 1 and 2.

use_mex can be set to either 0 or 1. If 1, then the mex (i.e. C or FORTRAN) routines are preferentially used for e.g. cutting or sqw files generation. Generally these should be used, as they are faster than the Matlab alternatives. However you can, if you wish, choose not to use the mex files and use the Matlab equivalents instead.

delete_tmp is set to either 0 or 1, depending on whether you wish tmp files to be deleted after the creation of an sqw file. If set to 0, the tmp files are not deleted. Generally this should be set to 1, except if you want to use write_nsqw_to_sqw command.

working_directory field defines the location where the tmp files are stored during sqw files generation or advanced cutting procedure. The default of this fieldis equal to output of Matlab tempdir command. A first gen_sqw satement will set this value to the folder, where you spe or nxspe files are stored, but you can set up this value to point to the fast hard drive or parallel file system location.

force_mex_if_use_mex option is normally used during debugging. In normal operational mode Horace fail back to Matlab if mex code is failing. If this option set to true, the Horace will fail if mex code does not work propertly.

high_perf_config_info provides access to Horace high performance options, relevant for work on high performance servers. This options would be better changed by modifying the high perfomance configuration itself. This configuration is returned by hpc_config command.

The options class_name, saveable, returns_defaults and config_folder are the options for experts.

 class_name -- just returns the name of current configuration file
 saveable   -- if true, means that the changes in configuration should be stored in file to be restored at next Horace initialization
 returns_defaults -- if true, allow to explore default configuration options ignoring any changes done to configuration by a user
 config_folder -- point to the location where configuration is stored to restore it from during the next Horace initialization.